Protein : PTPN6

Name PTPN6
Description protein tyrosine phosphatase, non-receptor type 6
Owner Public
URN urn:agi-llid:5777
Connectivity 205
Notes The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. N-terminal part of this PTP contains two tandem Src homolog (SH2) domains, which act as protein phospho-tyrosine binding domains, and mediate the interaction of this PTP with its substrates. This PTP is expressed primarily in hematopoietic cells, and functions as an important regulator of multiple signaling pathways in hematopoietic cells. This PTP has been shown to interact with, and dephosphorylate a wide spectrum of phospho-proteins involved in hematopoietic cell signaling. Three alternatively spliced variants of this gene, which encode distinct isoforms, have been reported.
Hugo ID 9658

Microarray ID 199973_Rn
1368010_at
u77038_at
u77038_g_at
A_42_P471271
A_51_P138521
A_52_P114722
A_52_P315942
X62055
206687_s_at
794_at
OH2590
MC530
SC62
X62055_at
rc_aa426411_s_at
A_32_P539491
A_14_P133954
A_23_P162486
OR2138A
CA330
102851_s_at
1456694_x_at
1460188_at
Msa.743.0_at
NM_013545
I_3343758
I_936462

GenBank ID 193808
200550
200551
388447
30027705
388450
7305133
AAA37796
AAA40007
AAC36008
AAC36009
AAD00151
AAD00152
AAH12660
AAP13944
AAP13945
AAP13953
AC002397
AK132509
AK150509
AK151077
AK151623
AK159686
AK159833
AK167923
AK169804
BAE21210
BAE29622
BAE30092
BAE41378
BC012660
M68902
M90389
NC_000072
NM_013545
NP_038573
NT_039356
NT_039369
P29351
S63763
S63764
S63803
U65951
U65952
U65953
U65954
U65955
NP_446360
NW_047696
P81718
AAD00262
AAH99824
AAL77056
AF468653
BC099824
NC_005103
NM_053908
U77038
U15536
U15537
U47924
AAA35963
AAA36610
AAA82879
AAA82880
AAB51322
AAB51323
AAD53317
AAH02523
AAH07667
AAP36054
AB079851
AF178946
AK223629
BAC81774
BAC81775
BAD97349
BC002523
BC007667
BG754792
BM742181
BT007390
M74903
M77273
NC_000012
NM_002831
NM_080548
NM_080549
NP_002822
NP_536858
NP_536859
NT_009759
NT_086792
P29350
U15528
34328901
18104991
557897
557899
557900
557889
557888
1633547
1732418
1732419
5825607
5825608
33876814
12803401
33873665
14043345
14065445
19063510
30583618
30583619
183915
183916
338079
34328902
18104993
51471135
34014274
34014275
34014276
30027706
388449
30027714
21903454
X62055
29805200
34328900
18104989
131469
338080
NW_043769
XM_282634
XP_282634
XM_289700
XP_289700
AH003242
34858854
16758787
16758788
4098326
4098327
34922906
51712708
7305132
28527518
3287367
2289909
2289910
4097662
4097668
4097663
4097664
4097665
4097666
4097669
15215087
15215088
193807

Chromosome position 6 60.22 cM
4q42
12p13

GO ID GO:0005515
GO:0004721
GO:0004725
GO:0004727
GO:0016787
GO:0007242
GO:0006470
GO:0019221
GO:0005737
GO:0007186
GO:0006915
GO:0007165
GO:0016020
GO:0005856
0001784
0004721
0004727
0005737
0019221
0008285
0009611
0004725
0005515
0005856
0006470
0006915
0007186
0007242
0016020
0016787

Alias hematopoietic phosphotyrosine phosphatase SHP-1
SHP-1Ls
sh2 phosphatase 1
sh2 phosphatase I
SH2-containing tyrosine phosphatase SHP-1
Src homology domain 2-containing tyrosine phosphatase SHP-1
PTP-1Cs
HCPH
Hematopoietic cell protein-tyrosine phosphatase
hemopoietic cell phosphatase
HPTP1C
protein tyrosine phosphatase, non-receptor type 6
Ptph6
PTPN6
SHP-1
SHP-1L
protein tyrosine phosphatase, non-receptor type VI
protein-tyrosine phosphatase 1C
SHP I
70 kda SHP-1L protein
PTP-1C
SH-PTP1
motheaten protein
me
hcp
Ptp1C
motheaten
hematopoietic cell protein-tyrosine phosphatase
Src homology domain 2 (SH2)-containing tyrosine phosphatase-1
hematopoietic cell phophatase
SH-PTP I
mgc124580

Organism Mus musculus
Rattus norvegicus
Homo sapiens
Human

MedLine Reference 10229828
12466851
8943354
11157073
10506221
10660620
1732748
7781604

LocusLink ID 15170
116689
5777
23565

FunctionalClass phosphoprotein phosphatase
phosphotyrosine binding
prenylated protein tyrosine phosphatase
hydrolase
protein binding
protein tyrosine phosphatase

RGD ID 620660

Hugo Symbol PTPN6

Unigene ID Rn.18985
Mm.271799
Hs.63489
Mm.1484

Keyword protein-tyrosine phosphatase
sh-2 domain
actin
protein phosphatase
protein tyrosine phosphatase activity
protein tyrosine phosphatase
protein phosphatase activity

GO Cellular Component cytoplasm
cytoskeleton
membrane

GO Molecular Function protein binding
protein phosphatase activity
protein tyrosine phosphatase activity
prenylated protein tyrosine phosphatase activity
hydrolase activity
protein binding activity

Cell Localization Cytoplasm

Pathway PDGF signaling
IL-3 signaling
IL-1 and IL-6 signaling
Erythropoietin signaling
Jak-Stat Pathway from IL6 Receptor
EGF
AGT-LRP2
AREG-EGFR
BDNF-NTRK1
BTC-EGFR
CD86-CR1
CNTF-LIFR
CSF1-CSF1R
CSF1-IL6R
CSF1-TNFRSF5
CSF3-CSF3R
CSF3-IL6R
DTR-EGFR
EGF-NGFR
EPO-EPOR
EREG-EGFR
F2-ITGAV
F2-LRP1
F2-LRP2
F2-THBD
FIGF-KDR
GH1-IGF1R
GRO1-EGFR
IFNB1-IFNAR1
IFNG-HLA-C
IGF1-BST1
IGF1-IGF2R
IGF1-LRP5
IL13-IL4R
IL1B-HLA-DRB1
IL1B-IL1R1
IL1B-IL1RAP
IL1B-IL6R
IL2-IL4R
IL3-CSF2RB2
IL3-EPOR
IL4-FCER2
IL4-IL2RG
IL4-IL4R
IL5-IL6ST
IL6-IL6R
IL6-IL6ST
IL6-LIFR
IL6-TNFRSF5
INS-EGFR
KITLG-KIT
LIF-IGF2R
LIF-IL6ST
LIF-LIFR
NGFB-NGFR
NGFB-NTRK1
NGFB-NTRK2
NGFB-NTRK3
NRG1-EGFR
NTF3-NTRK1
NTF5-NTRK1
OSM-CD22
OSM-LIFR
PGF-KDR
PTH-IL6ST
SDF1-IL6ST
SELPLG-ICAM1
TGFA-EGFR
THPO-EPOR
TNF-IL15RA
TNF-NGFR
TNF-TNFRSF1B
VEGF-EGFR
VEGFC-KDR
Full DuPont
DuPont 2
DuPont 4
Volcano 2
CLA Grow
FXR
HNF4a
Donna's proteomics

GO Biological Process cytokine and chemokine mediated signaling pathway
negative regulation of cell proliferation
response to wounding
G-protein coupled receptor protein signaling pathway
apoptosis
intracellular signaling cascade
protein amino acid dephosphorylation
signal transduction

Group Phosphatases
Sh2
Full DuPont
New Group
New Group
CLA Grow

EC Number 3.1.3.48

State isoform 1
isoform 2
isoform 3

State Description Transcript Variant: This variant (1) lacks an internal fragment within the coding region, which leads to a translation frame change when compared to variant 3. It encodes a protein that has an identical N-terminus and a different C-terminus, as compare...
Transcript Variant: This variant (2) contains a different 5' end region including 5' UTR and a small portion of the coding region, and lacks an internal fragment within the coding region, when compared to variant 3. The internal fragment missing leads ...
Transcript Variant: This variant (3) encodes the longest isoform (3).

MGI ID 96055

Swiss-Prot Accession P29350

OMIM ID 176883
OMIM:176883

Source Curated
BIND
ResNet